Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 SNX3-202ENST00000349379 890 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 LHPP-203ENST00000392757 840 ntTSL 3 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.24□□□□□ -0.93
LINC01554Q52M75 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AC024257.2-201ENST00000549699 147 ntBASIC9.24□□□□□ -0.93
LINC01554Q52M75 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AC131212.1-201ENST00000613771 668 ntBASIC9.24□□□□□ -0.93
LINC01554Q52M75 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AC080080.1-201ENST00000625121 2420 ntBASIC9.24□□□□□ -0.93
LINC01554Q52M75 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AC135279.3-201ENST00000610945 1311 ntBASIC9.24□□□□□ -0.93
LINC01554Q52M75 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LINC01554Q52M75 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LINC01554Q52M75 AC087386.2-201ENST00000623212 4637 ntBASIC9.24□□□□□ -0.93
LINC01554Q52M75 AC126335.2-201ENST00000623362 4637 ntBASIC9.24□□□□□ -0.93
LINC01554Q52M75 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 NKILA-202ENST00000614771 2598 ntBASIC9.23□□□□□ -0.93
LINC01554Q52M75 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AC005224.4-201ENST00000583262 1652 ntBASIC9.23□□□□□ -0.93
LINC01554Q52M75 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AC067750.1-201ENST00000608826 6545 ntBASIC9.23□□□□□ -0.93
LINC01554Q52M75 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AC011676.5-201ENST00000624864 2660 ntBASIC9.23□□□□□ -0.93
LINC01554Q52M75 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AC099791.1-201ENST00000416440 715 ntBASIC9.23□□□□□ -0.93
LINC01554Q52M75 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 AL731571.1-201ENST00000617058 5428 ntBASIC9.23□□□□□ -0.93
LINC01554Q52M75 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LINC01554Q52M75 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LINC01554Q52M75 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms