Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.51■□□□□ 0.55
PRAMEP78395 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEP78395 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PRAMEP78395 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PRAMEP78395 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEP78395 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 KRT18P23-201ENST00000435622 1283 ntBASIC18.51■□□□□ 0.55
PRAMEP78395 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PRAMEP78395 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.51■□□□□ 0.55
PRAMEP78395 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEP78395 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PRAMEP78395 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PRAMEP78395 KRT8P7-201ENST00000533003 1432 ntBASIC18.5■□□□□ 0.55
PRAMEP78395 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEP78395 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRAMEP78395 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEP78395 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEP78395 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.5■□□□□ 0.55
PRAMEP78395 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEP78395 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 AC010947.1-201ENST00000623454 693 ntBASIC18.5■□□□□ 0.55
PRAMEP78395 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.5■□□□□ 0.55
PRAMEP78395 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PRAMEP78395 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEP78395 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEP78395 AL354751.1-201ENST00000412768 1863 ntBASIC18.5■□□□□ 0.55
PRAMEP78395 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEP78395 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 HOXB1-202ENST00000577092 1414 ntBASIC18.49■□□□□ 0.55
PRAMEP78395 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.49■□□□□ 0.55
PRAMEP78395 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEP78395 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRAMEP78395 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEP78395 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEP78395 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEP78395 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEP78395 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEP78395 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRAMEP78395 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEP78395 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEP78395 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEP78395 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEP78395 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEP78395 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEP78395 ABALON-201ENST00000629058 1903 ntBASIC18.49■□□□□ 0.55
PRAMEP78395 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEP78395 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEP78395 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEP78395 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms