Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.49■□□□□ 0.87
ASIC1P78348 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 GMCL1P1-201ENST00000463439 1581 ntBASIC20.49■□□□□ 0.87
ASIC1P78348 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.49■□□□□ 0.87
ASIC1P78348 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ASIC1P78348 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ASIC1P78348 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.49■□□□□ 0.87
ASIC1P78348 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.49■□□□□ 0.87
ASIC1P78348 NOC2LP1-202ENST00000452600 2235 ntBASIC20.49■□□□□ 0.87
ASIC1P78348 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.48■□□□□ 0.87
ASIC1P78348 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.48■□□□□ 0.87
ASIC1P78348 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.48■□□□□ 0.87
ASIC1P78348 AC104390.1-201ENST00000555663 520 ntBASIC20.48■□□□□ 0.87
ASIC1P78348 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.48■□□□□ 0.87
ASIC1P78348 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 KRT18P22-201ENST00000402024 1347 ntBASIC20.48■□□□□ 0.87
ASIC1P78348 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ASIC1P78348 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.48■□□□□ 0.87
ASIC1P78348 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
ASIC1P78348 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ASIC1P78348 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.48■□□□□ 0.87
ASIC1P78348 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ASIC1P78348 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ASIC1P78348 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
ASIC1P78348 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ASIC1P78348 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ASIC1P78348 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ASIC1P78348 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.47■□□□□ 0.87
ASIC1P78348 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.47■□□□□ 0.87
ASIC1P78348 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.47■□□□□ 0.87
ASIC1P78348 AL512604.3-201ENST00000569583 964 ntBASIC20.47■□□□□ 0.87
ASIC1P78348 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
ASIC1P78348 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ASIC1P78348 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
ASIC1P78348 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.47■□□□□ 0.87
ASIC1P78348 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
ASIC1P78348 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.47■□□□□ 0.87
ASIC1P78348 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.47■□□□□ 0.87
ASIC1P78348 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ASIC1P78348 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.46■□□□□ 0.87
ASIC1P78348 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.46■□□□□ 0.87
ASIC1P78348 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ASIC1P78348 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
ASIC1P78348 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.46■□□□□ 0.87
ASIC1P78348 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.46■□□□□ 0.87
ASIC1P78348 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.46■□□□□ 0.87
ASIC1P78348 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.46■□□□□ 0.87
ASIC1P78348 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.46■□□□□ 0.87
ASIC1P78348 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ASIC1P78348 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
ASIC1P78348 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms