Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNRPEP62304 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.11□□□□□ -0.15
SNRPEP62304 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SNRPEP62304 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNRPEP62304 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SNRPEP62304 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SNRPEP62304 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNRPEP62304 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SNRPEP62304 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.1□□□□□ -0.15
SNRPEP62304 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.1□□□□□ -0.15
SNRPEP62304 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC14.1□□□□□ -0.15
SNRPEP62304 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.1□□□□□ -0.15
SNRPEP62304 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SNRPEP62304 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNRPEP62304 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 AC019171.1-201ENST00000601251 1056 ntBASIC14.1□□□□□ -0.15
SNRPEP62304 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.1□□□□□ -0.15
SNRPEP62304 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SNRPEP62304 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.1□□□□□ -0.15
SNRPEP62304 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.1□□□□□ -0.15
SNRPEP62304 FLJ13224-201ENST00000313737 1514 ntBASIC14.1□□□□□ -0.15
SNRPEP62304 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNRPEP62304 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNRPEP62304 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.1□□□□□ -0.15
SNRPEP62304 AL365209.1-201ENST00000624418 6473 ntBASIC14.09□□□□□ -0.15
SNRPEP62304 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.09□□□□□ -0.15
SNRPEP62304 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.09□□□□□ -0.15
SNRPEP62304 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SNRPEP62304 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.09□□□□□ -0.15
SNRPEP62304 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 AC006449.5-201ENST00000610658 2098 ntBASIC14.09□□□□□ -0.15
SNRPEP62304 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.09□□□□□ -0.15
SNRPEP62304 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.09□□□□□ -0.15
SNRPEP62304 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.09□□□□□ -0.15
SNRPEP62304 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SNRPEP62304 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SNRPEP62304 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.09□□□□□ -0.15
SNRPEP62304 AC068587.6-202ENST00000641839 5619 ntBASIC14.09□□□□□ -0.15
SNRPEP62304 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.08□□□□□ -0.15
SNRPEP62304 AC092384.3-202ENST00000564646 2873 ntBASIC14.08□□□□□ -0.15
SNRPEP62304 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNRPEP62304 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SNRPEP62304 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SNRPEP62304 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SNRPEP62304 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNRPEP62304 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SNRPEP62304 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNRPEP62304 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNRPEP62304 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SNRPEP62304 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.08□□□□□ -0.16
SNRPEP62304 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SNRPEP62304 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SNRPEP62304 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms