Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 C1QL1P1-201ENST00000568105 661 ntBASIC16.74■□□□□ 0.27
CXCR4P61073 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.74■□□□□ 0.27
CXCR4P61073 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 KRT8P41-201ENST00000533985 1514 ntBASIC16.74■□□□□ 0.27
CXCR4P61073 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CXCR4P61073 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CXCR4P61073 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CXCR4P61073 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CXCR4P61073 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.74■□□□□ 0.27
CXCR4P61073 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CXCR4P61073 NBPF21P-201ENST00000425093 1451 ntBASIC16.73■□□□□ 0.27
CXCR4P61073 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CXCR4P61073 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CXCR4P61073 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.73■□□□□ 0.27
CXCR4P61073 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 AL109923.1-201ENST00000618799 583 ntBASIC16.73■□□□□ 0.27
CXCR4P61073 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.73■□□□□ 0.27
CXCR4P61073 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CXCR4P61073 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CXCR4P61073 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.73■□□□□ 0.27
CXCR4P61073 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CXCR4P61073 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CXCR4P61073 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CXCR4P61073 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.72■□□□□ 0.27
CXCR4P61073 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.72■□□□□ 0.27
CXCR4P61073 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 KRT18P55-202ENST00000578578 1546 ntBASIC16.72■□□□□ 0.27
CXCR4P61073 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.72■□□□□ 0.27
CXCR4P61073 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.72■□□□□ 0.27
CXCR4P61073 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.72■□□□□ 0.27
CXCR4P61073 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.72■□□□□ 0.27
CXCR4P61073 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
CXCR4P61073 AC004264.1-201ENST00000608354 794 ntBASIC16.72■□□□□ 0.27
CXCR4P61073 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 GMCL1P1-201ENST00000463439 1581 ntBASIC16.72■□□□□ 0.27
CXCR4P61073 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
CXCR4P61073 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.72■□□□□ 0.27
CXCR4P61073 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CXCR4P61073 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 HTR7P1-201ENST00000538670 1336 ntBASIC16.71■□□□□ 0.27
CXCR4P61073 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CXCR4P61073 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.71■□□□□ 0.27
CXCR4P61073 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms