Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VSX2P58304 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.56■□□□□ 0.4
VSX2P58304 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 IER3-202ENST00000376377 1350 ntBASIC17.55■□□□□ 0.4
VSX2P58304 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VSX2P58304 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 MIR149-201ENST00000384879 89 ntBASIC17.55■□□□□ 0.4
VSX2P58304 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.55■□□□□ 0.4
VSX2P58304 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 AL645929.1-201ENST00000420084 975 ntBASIC17.55■□□□□ 0.4
VSX2P58304 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.55■□□□□ 0.4
VSX2P58304 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.55■□□□□ 0.4
VSX2P58304 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.55■□□□□ 0.4
VSX2P58304 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.55■□□□□ 0.4
VSX2P58304 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.55■□□□□ 0.4
VSX2P58304 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.55■□□□□ 0.4
VSX2P58304 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VSX2P58304 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.55■□□□□ 0.4
VSX2P58304 AP000550.4-202ENST00000639755 178 ntBASIC17.55■□□□□ 0.4
VSX2P58304 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.55■□□□□ 0.4
VSX2P58304 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VSX2P58304 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VSX2P58304 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VSX2P58304 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VSX2P58304 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.54■□□□□ 0.4
VSX2P58304 BCL2-203ENST00000589955 5011 ntBASIC17.54■□□□□ 0.4
VSX2P58304 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.54■□□□□ 0.4
VSX2P58304 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.54■□□□□ 0.4
VSX2P58304 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
VSX2P58304 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.54■□□□□ 0.4
VSX2P58304 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.54■□□□□ 0.4
VSX2P58304 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.54■□□□□ 0.4
VSX2P58304 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.54■□□□□ 0.4
VSX2P58304 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
VSX2P58304 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 AC009102.3-201ENST00000623118 1491 ntBASIC17.54■□□□□ 0.4
VSX2P58304 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.54■□□□□ 0.4
VSX2P58304 AC093503.3-201ENST00000624917 2352 ntBASIC17.54■□□□□ 0.4
VSX2P58304 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
VSX2P58304 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 AC126763.1-201ENST00000552015 2118 ntBASIC17.54■□□□□ 0.4
VSX2P58304 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
VSX2P58304 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
VSX2P58304 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VSX2P58304 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.54■□□□□ 0.4
VSX2P58304 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.54■□□□□ 0.4
VSX2P58304 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VSX2P58304 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.53■□□□□ 0.4
VSX2P58304 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
VSX2P58304 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VSX2P58304 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VSX2P58304 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
VSX2P58304 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.53■□□□□ 0.4
VSX2P58304 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.53■□□□□ 0.4
VSX2P58304 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.53■□□□□ 0.4
VSX2P58304 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.53■□□□□ 0.4
VSX2P58304 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.53■□□□□ 0.4
VSX2P58304 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VSX2P58304 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.53■□□□□ 0.4
VSX2P58304 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.53■□□□□ 0.4
VSX2P58304 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VSX2P58304 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms