Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 AC009113.1-201ENST00000570267 2443 ntBASIC17.23■□□□□ 0.35
RAB38P57729 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB38P57729 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 ESPNP-201ENST00000270691 2015 ntBASIC17.23■□□□□ 0.35
RAB38P57729 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB38P57729 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB38P57729 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB38P57729 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 LINC01126-201ENST00000623515 1646 ntBASIC17.23■□□□□ 0.35
RAB38P57729 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB38P57729 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAB38P57729 KRT18P48-201ENST00000434763 852 ntBASIC17.23■□□□□ 0.35
RAB38P57729 KRT18P35-201ENST00000510488 1269 ntBASIC17.23■□□□□ 0.35
RAB38P57729 VENTXP5-201ENST00000523979 775 ntBASIC17.23■□□□□ 0.35
RAB38P57729 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB38P57729 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB38P57729 AL121956.5-201ENST00000625261 221 ntBASIC17.23■□□□□ 0.35
RAB38P57729 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.23■□□□□ 0.35
RAB38P57729 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB38P57729 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB38P57729 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB38P57729 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB38P57729 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB38P57729 AL162741.1-201ENST00000565563 1558 ntBASIC17.23■□□□□ 0.35
RAB38P57729 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RAB38P57729 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB38P57729 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB38P57729 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RAB38P57729 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RAB38P57729 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB38P57729 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 MIR662-201ENST00000384847 95 ntBASIC17.22■□□□□ 0.35
RAB38P57729 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 SPDYE13P-201ENST00000445314 798 ntBASIC17.22■□□□□ 0.35
RAB38P57729 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB38P57729 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB38P57729 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.22■□□□□ 0.35
RAB38P57729 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RAB38P57729 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB38P57729 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB38P57729 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 KRT89P-201ENST00000620027 1478 ntBASIC17.22■□□□□ 0.35
RAB38P57729 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB38P57729 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB38P57729 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB38P57729 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RAB38P57729 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB38P57729 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAB38P57729 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB38P57729 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB38P57729 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB38P57729 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RAB38P57729 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
RAB38P57729 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB38P57729 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB38P57729 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.21■□□□□ 0.35
RAB38P57729 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB38P57729 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 AL136038.3-201ENST00000561909 1096 ntBASIC17.21■□□□□ 0.35
RAB38P57729 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.21■□□□□ 0.35
RAB38P57729 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB38P57729 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.21■□□□□ 0.35
RAB38P57729 AL445228.2-201ENST00000605589 952 ntBASIC17.21■□□□□ 0.35
RAB38P57729 AC104581.1-202ENST00000635932 2618 ntBASIC17.21■□□□□ 0.35
RAB38P57729 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RAB38P57729 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB38P57729 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB38P57729 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
RAB38P57729 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms