Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH15P55291 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH15P55291 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH15P55291 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH15P55291 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH15P55291 AL158047.1-201ENST00000445918 881 ntBASIC17.12■□□□□ 0.33
CDH15P55291 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH15P55291 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH15P55291 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH15P55291 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH15P55291 HLA-B-256ENST00000639848 1089 ntBASIC17.12■□□□□ 0.33
CDH15P55291 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH15P55291 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CDH15P55291 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDH15P55291 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDH15P55291 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH15P55291 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH15P55291 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH15P55291 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH15P55291 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH15P55291 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH15P55291 AP001094.4-201ENST00000579008 2176 ntBASIC17.11■□□□□ 0.33
CDH15P55291 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDH15P55291 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDH15P55291 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH15P55291 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH15P55291 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH15P55291 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH15P55291 AC073648.6-201ENST00000641589 218 ntBASIC17.11■□□□□ 0.33
CDH15P55291 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDH15P55291 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH15P55291 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH15P55291 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH15P55291 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH15P55291 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH15P55291 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH15P55291 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH15P55291 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH15P55291 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH15P55291 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDH15P55291 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CDH15P55291 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDH15P55291 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH15P55291 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH15P55291 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH15P55291 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH15P55291 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms