Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EPHB4P54760 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 IL9RP2-201ENST00000423948 1312 ntBASIC20.59■□□□□ 0.89
EPHB4P54760 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.59■□□□□ 0.89
EPHB4P54760 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
EPHB4P54760 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
EPHB4P54760 AC092183.1-201ENST00000469884 875 ntBASIC20.59■□□□□ 0.89
EPHB4P54760 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.59■□□□□ 0.89
EPHB4P54760 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.59■□□□□ 0.89
EPHB4P54760 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.59■□□□□ 0.89
EPHB4P54760 MIR3917-201ENST00000580971 93 ntBASIC20.59■□□□□ 0.89
EPHB4P54760 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.59■□□□□ 0.89
EPHB4P54760 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EPHB4P54760 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
EPHB4P54760 Z83836.1-201ENST00000624605 1642 ntBASIC20.59■□□□□ 0.89
EPHB4P54760 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
EPHB4P54760 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
EPHB4P54760 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.58■□□□□ 0.89
EPHB4P54760 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
EPHB4P54760 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.58■□□□□ 0.89
EPHB4P54760 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.58■□□□□ 0.89
EPHB4P54760 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
EPHB4P54760 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.58■□□□□ 0.89
EPHB4P54760 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.58■□□□□ 0.89
EPHB4P54760 AC099336.1-202ENST00000602961 463 ntBASIC20.58■□□□□ 0.89
EPHB4P54760 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB4P54760 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
EPHB4P54760 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.58■□□□□ 0.89
EPHB4P54760 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.58■□□□□ 0.88
EPHB4P54760 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
EPHB4P54760 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB4P54760 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 AL049812.1-201ENST00000432563 2267 ntBASIC20.57■□□□□ 0.88
EPHB4P54760 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.57■□□□□ 0.88
EPHB4P54760 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
EPHB4P54760 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
EPHB4P54760 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHB4P54760 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
EPHB4P54760 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.57■□□□□ 0.88
EPHB4P54760 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.57■□□□□ 0.88
EPHB4P54760 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 TP73-AS1-207ENST00000624167 988 ntBASIC20.57■□□□□ 0.88
EPHB4P54760 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHB4P54760 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.57■□□□□ 0.88
EPHB4P54760 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EPHB4P54760 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB4P54760 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EPHB4P54760 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHB4P54760 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
EPHB4P54760 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EPHB4P54760 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
EPHB4P54760 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EPHB4P54760 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 AF238378.1-201ENST00000526806 358 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms