Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RAD23BP54727 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.61■□□□□ 0.73
RAD23BP54727 STARP1-201ENST00000397973 869 ntBASIC19.61■□□□□ 0.73
RAD23BP54727 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.61■□□□□ 0.73
RAD23BP54727 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAD23BP54727 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.61■□□□□ 0.73
RAD23BP54727 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.61■□□□□ 0.73
RAD23BP54727 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAD23BP54727 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAD23BP54727 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.6■□□□□ 0.73
RAD23BP54727 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAD23BP54727 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAD23BP54727 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAD23BP54727 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.6■□□□□ 0.73
RAD23BP54727 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.6■□□□□ 0.73
RAD23BP54727 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.6■□□□□ 0.73
RAD23BP54727 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 AC034232.1-201ENST00000506026 1064 ntBASIC19.6■□□□□ 0.73
RAD23BP54727 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAD23BP54727 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
RAD23BP54727 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAD23BP54727 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAD23BP54727 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
RAD23BP54727 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAD23BP54727 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.59■□□□□ 0.73
RAD23BP54727 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.59■□□□□ 0.73
RAD23BP54727 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.59■□□□□ 0.73
RAD23BP54727 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAD23BP54727 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAD23BP54727 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
RAD23BP54727 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RAD23BP54727 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.59■□□□□ 0.73
RAD23BP54727 AL359075.1-203ENST00000462729 1002 ntBASIC19.59■□□□□ 0.73
RAD23BP54727 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.59■□□□□ 0.73
RAD23BP54727 AC022616.7-201ENST00000525383 220 ntBASIC19.59■□□□□ 0.73
RAD23BP54727 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.59■□□□□ 0.73
RAD23BP54727 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.59■□□□□ 0.73
RAD23BP54727 AC079602.3-201ENST00000623931 403 ntBASIC19.59■□□□□ 0.73
RAD23BP54727 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAD23BP54727 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.59■□□□□ 0.73
RAD23BP54727 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.58■□□□□ 0.73
RAD23BP54727 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.58■□□□□ 0.73
RAD23BP54727 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.58■□□□□ 0.73
RAD23BP54727 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.58■□□□□ 0.73
RAD23BP54727 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.58■□□□□ 0.73
RAD23BP54727 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.58■□□□□ 0.73
RAD23BP54727 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAD23BP54727 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.58■□□□□ 0.72
RAD23BP54727 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.58■□□□□ 0.72
RAD23BP54727 FAM8A6P-201ENST00000407496 1135 ntBASIC19.58■□□□□ 0.72
RAD23BP54727 HOMER2P1-201ENST00000455653 964 ntBASIC19.58■□□□□ 0.72
RAD23BP54727 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.58■□□□□ 0.72
RAD23BP54727 AC009065.1-201ENST00000564055 1225 ntBASIC19.58■□□□□ 0.72
RAD23BP54727 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.58■□□□□ 0.72
RAD23BP54727 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.58■□□□□ 0.72
RAD23BP54727 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RAD23BP54727 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAD23BP54727 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms