Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ITGA8P53708 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ITGA8P53708 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ITGA8P53708 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ITGA8P53708 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.85■□□□□ 0.61
ITGA8P53708 AF186192.3-201ENST00000583427 947 ntBASIC18.85■□□□□ 0.61
ITGA8P53708 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ITGA8P53708 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ITGA8P53708 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ITGA8P53708 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.85■□□□□ 0.61
ITGA8P53708 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ITGA8P53708 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.84■□□□□ 0.61
ITGA8P53708 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.84■□□□□ 0.61
ITGA8P53708 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.84■□□□□ 0.61
ITGA8P53708 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.84■□□□□ 0.61
ITGA8P53708 MCCD1P1-208ENST00000445732 328 ntBASIC18.84■□□□□ 0.61
ITGA8P53708 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.84■□□□□ 0.61
ITGA8P53708 C1QBPP2-201ENST00000528754 825 ntBASIC18.84■□□□□ 0.61
ITGA8P53708 AC073195.1-201ENST00000607241 877 ntBASIC18.84■□□□□ 0.61
ITGA8P53708 AC034236.2-201ENST00000606662 1610 ntBASIC18.84■□□□□ 0.61
ITGA8P53708 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ITGA8P53708 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ITGA8P53708 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ITGA8P53708 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ITGA8P53708 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ITGA8P53708 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ITGA8P53708 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ITGA8P53708 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ITGA8P53708 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ITGA8P53708 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.83■□□□□ 0.61
ITGA8P53708 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ITGA8P53708 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ITGA8P53708 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ITGA8P53708 AC012317.2-201ENST00000623305 2251 ntBASIC18.83■□□□□ 0.61
ITGA8P53708 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 MESTP1-201ENST00000404287 994 ntBASIC18.83■□□□□ 0.6
ITGA8P53708 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.83■□□□□ 0.6
ITGA8P53708 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.83■□□□□ 0.6
ITGA8P53708 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.83■□□□□ 0.6
ITGA8P53708 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ITGA8P53708 AP000692.2-201ENST00000608391 879 ntBASIC18.83■□□□□ 0.6
ITGA8P53708 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 AC012313.1-201ENST00000593393 3059 ntBASIC18.83■□□□□ 0.6
ITGA8P53708 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.83■□□□□ 0.6
ITGA8P53708 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
ITGA8P53708 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.83■□□□□ 0.6
ITGA8P53708 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ITGA8P53708 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ITGA8P53708 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ITGA8P53708 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ITGA8P53708 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ITGA8P53708 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.82■□□□□ 0.6
ITGA8P53708 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ITGA8P53708 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.82■□□□□ 0.6
ITGA8P53708 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.82■□□□□ 0.6
ITGA8P53708 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.82■□□□□ 0.6
ITGA8P53708 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.82■□□□□ 0.6
ITGA8P53708 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
ITGA8P53708 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ITGA8P53708 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ITGA8P53708 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.82■□□□□ 0.6
ITGA8P53708 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ITGA8P53708 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.81■□□□□ 0.6
ITGA8P53708 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms