Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PDE6CP51160 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.84■□□□□ 0.77
PDE6CP51160 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.84■□□□□ 0.77
PDE6CP51160 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PDE6CP51160 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDE6CP51160 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PDE6CP51160 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.83■□□□□ 0.77
PDE6CP51160 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PDE6CP51160 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDE6CP51160 AP000593.1-201ENST00000393668 712 ntBASIC19.83■□□□□ 0.77
PDE6CP51160 HOMER2P1-201ENST00000455653 964 ntBASIC19.83■□□□□ 0.77
PDE6CP51160 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.83■□□□□ 0.77
PDE6CP51160 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 AC005332.8-201ENST00000622750 2735 ntBASIC19.83■□□□□ 0.76
PDE6CP51160 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.83■□□□□ 0.76
PDE6CP51160 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
PDE6CP51160 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.83■□□□□ 0.76
PDE6CP51160 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDE6CP51160 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.82■□□□□ 0.76
PDE6CP51160 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PDE6CP51160 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDE6CP51160 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6CP51160 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.82■□□□□ 0.76
PDE6CP51160 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.82■□□□□ 0.76
PDE6CP51160 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PDE6CP51160 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6CP51160 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PDE6CP51160 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6CP51160 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.82■□□□□ 0.76
PDE6CP51160 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDE6CP51160 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 NEK4P2-201ENST00000580004 1012 ntBASIC19.82■□□□□ 0.76
PDE6CP51160 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.82■□□□□ 0.76
PDE6CP51160 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.82■□□□□ 0.76
PDE6CP51160 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 AL162741.1-201ENST00000565563 1558 ntBASIC19.82■□□□□ 0.76
PDE6CP51160 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.82■□□□□ 0.76
PDE6CP51160 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDE6CP51160 AL354751.1-201ENST00000412768 1863 ntBASIC19.82■□□□□ 0.76
PDE6CP51160 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.81■□□□□ 0.76
PDE6CP51160 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.81■□□□□ 0.76
PDE6CP51160 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
PDE6CP51160 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.81■□□□□ 0.76
PDE6CP51160 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6CP51160 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6CP51160 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6CP51160 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.81■□□□□ 0.76
PDE6CP51160 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.81■□□□□ 0.76
PDE6CP51160 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.81■□□□□ 0.76
PDE6CP51160 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDE6CP51160 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.81■□□□□ 0.76
PDE6CP51160 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
PDE6CP51160 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6CP51160 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDE6CP51160 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDE6CP51160 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.81■□□□□ 0.76
PDE6CP51160 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.81■□□□□ 0.76
PDE6CP51160 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.81■□□□□ 0.76
PDE6CP51160 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDE6CP51160 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms