Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCC3P46736 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.48■□□□□ 0.71
BRCC3P46736 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCC3P46736 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
BRCC3P46736 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.48■□□□□ 0.71
BRCC3P46736 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.48■□□□□ 0.71
BRCC3P46736 AC091304.2-201ENST00000564639 760 ntBASIC19.48■□□□□ 0.71
BRCC3P46736 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.48■□□□□ 0.71
BRCC3P46736 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
BRCC3P46736 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRCC3P46736 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 NSUN5P1-202ENST00000421140 1535 ntBASIC19.47■□□□□ 0.71
BRCC3P46736 NSUN5P2-203ENST00000457352 1529 ntBASIC19.47■□□□□ 0.71
BRCC3P46736 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.47■□□□□ 0.71
BRCC3P46736 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.47■□□□□ 0.71
BRCC3P46736 AC246785.2-201ENST00000432512 513 ntBASIC19.47■□□□□ 0.71
BRCC3P46736 EMBP1-201ENST00000458200 901 ntBASIC19.47■□□□□ 0.71
BRCC3P46736 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.47■□□□□ 0.71
BRCC3P46736 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.47■□□□□ 0.71
BRCC3P46736 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.47■□□□□ 0.71
BRCC3P46736 KRT18P31-201ENST00000506277 1292 ntBASIC19.47■□□□□ 0.71
BRCC3P46736 AC113404.2-201ENST00000507884 177 ntBASIC19.47■□□□□ 0.71
BRCC3P46736 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 AL121772.3-201ENST00000610840 674 ntBASIC19.47■□□□□ 0.71
BRCC3P46736 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.47■□□□□ 0.71
BRCC3P46736 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.47■□□□□ 0.71
BRCC3P46736 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
BRCC3P46736 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRCC3P46736 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRCC3P46736 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.47■□□□□ 0.71
BRCC3P46736 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.46■□□□□ 0.71
BRCC3P46736 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
BRCC3P46736 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.46■□□□□ 0.71
BRCC3P46736 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCC3P46736 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.46■□□□□ 0.71
BRCC3P46736 AC011840.4-201ENST00000578471 627 ntBASIC19.46■□□□□ 0.71
BRCC3P46736 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.46■□□□□ 0.71
BRCC3P46736 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCC3P46736 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 AL031598.1-201ENST00000561511 1773 ntBASIC19.46■□□□□ 0.71
BRCC3P46736 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BRCC3P46736 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCC3P46736 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.46■□□□□ 0.71
BRCC3P46736 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BRCC3P46736 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.45■□□□□ 0.7
BRCC3P46736 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.45■□□□□ 0.7
BRCC3P46736 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.45■□□□□ 0.7
BRCC3P46736 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BRCC3P46736 AC004870.1-201ENST00000315132 882 ntBASIC19.45■□□□□ 0.7
BRCC3P46736 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms