Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CEACAM3P40198 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.98□□□□□ -0.01
CEACAM3P40198 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 AK4P3-201ENST00000418260 669 ntBASIC14.98□□□□□ -0.01
CEACAM3P40198 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 YBX1P2-201ENST00000489612 999 ntBASIC14.98□□□□□ -0.01
CEACAM3P40198 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.98□□□□□ -0.01
CEACAM3P40198 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CEACAM3P40198 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CEACAM3P40198 AL023973.1-201ENST00000624619 620 ntBASIC14.98□□□□□ -0.01
CEACAM3P40198 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CEACAM3P40198 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CEACAM3P40198 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CEACAM3P40198 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.97□□□□□ -0.01
CEACAM3P40198 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.97□□□□□ -0.01
CEACAM3P40198 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CEACAM3P40198 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
CEACAM3P40198 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.97□□□□□ -0.01
CEACAM3P40198 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CEACAM3P40198 MIR149-201ENST00000384879 89 ntBASIC14.97□□□□□ -0.01
CEACAM3P40198 SEC1P-202ENST00000473944 940 ntBASIC14.97□□□□□ -0.01
CEACAM3P40198 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.97□□□□□ -0.01
CEACAM3P40198 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CEACAM3P40198 AC008687.5-201ENST00000593746 558 ntBASIC14.97□□□□□ -0.01
CEACAM3P40198 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 AC139887.4-201ENST00000607877 719 ntBASIC14.97□□□□□ -0.01
CEACAM3P40198 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.97□□□□□ -0.01
CEACAM3P40198 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.97□□□□□ -0.01
CEACAM3P40198 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CEACAM3P40198 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CEACAM3P40198 AL163051.1-201ENST00000569214 1512 ntBASIC14.97□□□□□ -0.01
CEACAM3P40198 AC004408.2-201ENST00000623613 2777 ntBASIC14.96□□□□□ -0.01
CEACAM3P40198 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CEACAM3P40198 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CEACAM3P40198 AC009102.3-201ENST00000623118 1491 ntBASIC14.96□□□□□ -0.01
CEACAM3P40198 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.96□□□□□ -0.01
CEACAM3P40198 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CEACAM3P40198 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.96□□□□□ -0.01
CEACAM3P40198 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.96□□□□□ -0.01
CEACAM3P40198 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CEACAM3P40198 KRT18P21-201ENST00000515767 1272 ntBASIC14.96□□□□□ -0.01
CEACAM3P40198 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.96□□□□□ -0.01
CEACAM3P40198 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 RN7SL850P-201ENST00000579959 291 ntBASIC14.96□□□□□ -0.01
CEACAM3P40198 MIR3917-201ENST00000580971 93 ntBASIC14.96□□□□□ -0.01
CEACAM3P40198 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CEACAM3P40198 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms