Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SNCAP37840 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SNCAP37840 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SNCAP37840 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.12■□□□□ 0.01
SNCAP37840 SLC25A6P5-201ENST00000435663 894 ntBASIC15.12■□□□□ 0.01
SNCAP37840 AC069152.1-201ENST00000438030 544 ntBASIC15.12■□□□□ 0.01
SNCAP37840 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SNCAP37840 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.12■□□□□ 0.01
SNCAP37840 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.12■□□□□ 0.01
SNCAP37840 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.12■□□□□ 0.01
SNCAP37840 AL160286.2-201ENST00000567150 934 ntBASIC15.12■□□□□ 0.01
SNCAP37840 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.12■□□□□ 0.01
SNCAP37840 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.12■□□□□ 0.01
SNCAP37840 AC083906.6-201ENST00000641366 219 ntBASIC15.12■□□□□ 0.01
SNCAP37840 AC135776.1-201ENST00000319817 2481 ntBASIC15.12■□□□□ 0.01
SNCAP37840 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.12■□□□□ 0.01
SNCAP37840 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.12■□□□□ 0.01
SNCAP37840 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.12■□□□□ 0.01
SNCAP37840 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNCAP37840 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SNCAP37840 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 POM121L13P-201ENST00000422362 380 ntBASIC15.11■□□□□ 0.01
SNCAP37840 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNCAP37840 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNCAP37840 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNCAP37840 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SNCAP37840 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
SNCAP37840 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SNCAP37840 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.1■□□□□ 0.01
SNCAP37840 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNCAP37840 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SNCAP37840 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.1■□□□□ 0.01
SNCAP37840 AC011270.2-201ENST00000624293 2550 ntBASIC15.1■□□□□ 0.01
SNCAP37840 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNCAP37840 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.1■□□□□ 0.01
SNCAP37840 NBPF21P-201ENST00000425093 1451 ntBASIC15.1■□□□□ 0.01
SNCAP37840 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNCAP37840 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SNCAP37840 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SNCAP37840 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNCAP37840 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.1■□□□□ 0.01
SNCAP37840 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.1■□□□□ 0.01
SNCAP37840 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.1■□□□□ 0.01
SNCAP37840 AC098934.4-201ENST00000564127 592 ntBASIC15.1■□□□□ 0.01
SNCAP37840 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.1■□□□□ 0.01
SNCAP37840 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNCAP37840 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNCAP37840 PKD1P5-201ENST00000532415 10291 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms