Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.62■□□□□ 0.89
CTGFP29279 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.62■□□□□ 0.89
CTGFP29279 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.62■□□□□ 0.89
CTGFP29279 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CTGFP29279 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.62■□□□□ 0.89
CTGFP29279 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTGFP29279 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CTGFP29279 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.61■□□□□ 0.89
CTGFP29279 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.61■□□□□ 0.89
CTGFP29279 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.61■□□□□ 0.89
CTGFP29279 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.61■□□□□ 0.89
CTGFP29279 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.61■□□□□ 0.89
CTGFP29279 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.61■□□□□ 0.89
CTGFP29279 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.61■□□□□ 0.89
CTGFP29279 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.61■□□□□ 0.89
CTGFP29279 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.61■□□□□ 0.89
CTGFP29279 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTGFP29279 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CTGFP29279 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
CTGFP29279 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.6■□□□□ 0.89
CTGFP29279 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CTGFP29279 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.6■□□□□ 0.89
CTGFP29279 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTGFP29279 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTGFP29279 LAGE3P1-201ENST00000425356 484 ntBASIC20.6■□□□□ 0.89
CTGFP29279 KRT18P27-201ENST00000427733 1299 ntBASIC20.6■□□□□ 0.89
CTGFP29279 BX005266.1-201ENST00000473402 457 ntBASIC20.6■□□□□ 0.89
CTGFP29279 ALG1L5P-201ENST00000482043 771 ntBASIC20.6■□□□□ 0.89
CTGFP29279 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.6■□□□□ 0.89
CTGFP29279 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.6■□□□□ 0.89
CTGFP29279 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.6■□□□□ 0.89
CTGFP29279 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.6■□□□□ 0.89
CTGFP29279 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTGFP29279 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.6■□□□□ 0.89
CTGFP29279 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CTGFP29279 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.59■□□□□ 0.89
CTGFP29279 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.59■□□□□ 0.89
CTGFP29279 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.59■□□□□ 0.89
CTGFP29279 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.59■□□□□ 0.89
CTGFP29279 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 AC073621.1-201ENST00000392730 636 ntBASIC20.59■□□□□ 0.89
CTGFP29279 MCCD1P2-201ENST00000423228 335 ntBASIC20.59■□□□□ 0.89
CTGFP29279 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 YBX1P5-201ENST00000509441 847 ntBASIC20.59■□□□□ 0.89
CTGFP29279 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.59■□□□□ 0.89
CTGFP29279 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.59■□□□□ 0.89
CTGFP29279 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.59■□□□□ 0.89
CTGFP29279 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CTGFP29279 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.59■□□□□ 0.89
CTGFP29279 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTGFP29279 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.59■□□□□ 0.89
CTGFP29279 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CTGFP29279 AC008687.5-201ENST00000593746 558 ntBASIC20.59■□□□□ 0.89
CTGFP29279 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.59■□□□□ 0.89
CTGFP29279 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
CTGFP29279 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.59■□□□□ 0.89
CTGFP29279 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTGFP29279 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CTGFP29279 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CTGFP29279 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.58■□□□□ 0.89
CTGFP29279 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms