Protein–RNA interactions for Protein: P28715

ERCC5, DNA repair protein complementing XP-G cells, humanhuman

Predicted RBP Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC5P28715 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC5P28715 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC5P28715 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ERCC5P28715 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ERCC5P28715 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC5P28715 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.31■□□□□ 0.84
ERCC5P28715 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC5P28715 FAM201B-201ENST00000458407 597 ntBASIC20.31■□□□□ 0.84
ERCC5P28715 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.31■□□□□ 0.84
ERCC5P28715 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ERCC5P28715 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
ERCC5P28715 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC5P28715 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.31■□□□□ 0.84
ERCC5P28715 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC5P28715 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.31■□□□□ 0.84
ERCC5P28715 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ERCC5P28715 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.31■□□□□ 0.84
ERCC5P28715 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC5P28715 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ERCC5P28715 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 ABHD17AP1-201ENST00000358206 933 ntBASIC20.3■□□□□ 0.84
ERCC5P28715 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.3■□□□□ 0.84
ERCC5P28715 RPS2P55-201ENST00000397318 883 ntBASIC20.3■□□□□ 0.84
ERCC5P28715 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.3■□□□□ 0.84
ERCC5P28715 AC107956.1-201ENST00000494359 873 ntBASIC20.3■□□□□ 0.84
ERCC5P28715 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.3■□□□□ 0.84
ERCC5P28715 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
ERCC5P28715 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 AC093010.1-201ENST00000473625 1624 ntBASIC20.3■□□□□ 0.84
ERCC5P28715 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.3■□□□□ 0.84
ERCC5P28715 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.3■□□□□ 0.84
ERCC5P28715 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.3■□□□□ 0.84
ERCC5P28715 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ERCC5P28715 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.29■□□□□ 0.84
ERCC5P28715 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC5P28715 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC5P28715 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ERCC5P28715 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.29■□□□□ 0.84
ERCC5P28715 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ERCC5P28715 CRYGFP-201ENST00000418459 633 ntBASIC20.29■□□□□ 0.84
ERCC5P28715 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.29■□□□□ 0.84
ERCC5P28715 AP005242.2-201ENST00000580065 1175 ntBASIC20.29■□□□□ 0.84
ERCC5P28715 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.29■□□□□ 0.84
ERCC5P28715 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.29■□□□□ 0.84
ERCC5P28715 AP001412.1-201ENST00000608405 714 ntBASIC20.29■□□□□ 0.84
ERCC5P28715 REXO1L10P-201ENST00000615707 1290 ntBASIC20.29■□□□□ 0.84
ERCC5P28715 REXO1L12P-201ENST00000622156 912 ntBASIC20.29■□□□□ 0.84
ERCC5P28715 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ERCC5P28715 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ERCC5P28715 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
ERCC5P28715 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ERCC5P28715 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ERCC5P28715 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ERCC5P28715 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.28■□□□□ 0.84
ERCC5P28715 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ERCC5P28715 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ERCC5P28715 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms