Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB4AP20338 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB4AP20338 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RAB4AP20338 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB4AP20338 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB4AP20338 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 AL512353.2-201ENST00000448759 1962 ntBASIC14.07□□□□□ -0.16
RAB4AP20338 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB4AP20338 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
RAB4AP20338 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB4AP20338 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB4AP20338 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB4AP20338 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB4AP20338 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB4AP20338 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB4AP20338 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB4AP20338 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RAB4AP20338 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms