Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.68■□□□□ 0.58
NFKB1P19838 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 AC141257.4-201ENST00000634557 245 ntBASIC18.68■□□□□ 0.58
NFKB1P19838 AC136944.6-201ENST00000634818 245 ntBASIC18.68■□□□□ 0.58
NFKB1P19838 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NFKB1P19838 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NFKB1P19838 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.68■□□□□ 0.58
NFKB1P19838 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NFKB1P19838 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.67■□□□□ 0.58
NFKB1P19838 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.67■□□□□ 0.58
NFKB1P19838 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.67■□□□□ 0.58
NFKB1P19838 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NFKB1P19838 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NFKB1P19838 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.67■□□□□ 0.58
NFKB1P19838 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.67■□□□□ 0.58
NFKB1P19838 AC010203.1-204ENST00000548782 407 ntBASIC18.67■□□□□ 0.58
NFKB1P19838 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 AC012306.2-201ENST00000609350 630 ntBASIC18.67■□□□□ 0.58
NFKB1P19838 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NFKB1P19838 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.67■□□□□ 0.58
NFKB1P19838 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFKB1P19838 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.67■□□□□ 0.58
NFKB1P19838 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.66■□□□□ 0.58
NFKB1P19838 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NFKB1P19838 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.66■□□□□ 0.58
NFKB1P19838 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.66■□□□□ 0.58
NFKB1P19838 MIR3180-4-201ENST00000582223 153 ntBASIC18.66■□□□□ 0.58
NFKB1P19838 AL138966.2-201ENST00000621997 464 ntBASIC18.66■□□□□ 0.58
NFKB1P19838 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NFKB1P19838 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.66■□□□□ 0.58
NFKB1P19838 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NFKB1P19838 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NFKB1P19838 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NFKB1P19838 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.65■□□□□ 0.58
NFKB1P19838 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 AC009065.1-201ENST00000564055 1225 ntBASIC18.65■□□□□ 0.58
NFKB1P19838 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NFKB1P19838 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NFKB1P19838 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFKB1P19838 AC097493.4-201ENST00000641197 219 ntBASIC18.65■□□□□ 0.58
NFKB1P19838 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms