Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCNAP12004 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCNAP12004 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCNAP12004 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCNAP12004 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.9■□□□□ 0.46
PCNAP12004 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCNAP12004 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCNAP12004 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCNAP12004 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCNAP12004 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCNAP12004 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCNAP12004 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.89■□□□□ 0.46
PCNAP12004 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.89■□□□□ 0.46
PCNAP12004 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
PCNAP12004 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCNAP12004 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCNAP12004 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.89■□□□□ 0.45
PCNAP12004 AC036111.1-201ENST00000533973 1582 ntBASIC17.89■□□□□ 0.45
PCNAP12004 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 MIR564-202ENST00000385049 94 ntBASIC17.89■□□□□ 0.45
PCNAP12004 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 AL596275.1-201ENST00000423464 877 ntBASIC17.89■□□□□ 0.45
PCNAP12004 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.89■□□□□ 0.45
PCNAP12004 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.89■□□□□ 0.45
PCNAP12004 MIR3180-5-201ENST00000583743 153 ntBASIC17.89■□□□□ 0.45
PCNAP12004 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.89■□□□□ 0.45
PCNAP12004 AC116562.4-202ENST00000641738 218 ntBASIC17.89■□□□□ 0.45
PCNAP12004 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCNAP12004 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCNAP12004 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCNAP12004 KRT8P45-201ENST00000414328 1447 ntBASIC17.89■□□□□ 0.45
PCNAP12004 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.89■□□□□ 0.45
PCNAP12004 AC073592.3-201ENST00000625118 1834 ntBASIC17.88■□□□□ 0.45
PCNAP12004 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCNAP12004 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 AL353719.1-201ENST00000566847 864 ntBASIC17.88■□□□□ 0.45
PCNAP12004 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.88■□□□□ 0.45
PCNAP12004 AL023803.3-201ENST00000615559 522 ntBASIC17.88■□□□□ 0.45
PCNAP12004 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 AP000997.3-201ENST00000623333 2250 ntBASIC17.88■□□□□ 0.45
PCNAP12004 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.88■□□□□ 0.45
PCNAP12004 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PCNAP12004 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCNAP12004 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCNAP12004 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.87■□□□□ 0.45
PCNAP12004 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.87■□□□□ 0.45
PCNAP12004 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.87■□□□□ 0.45
PCNAP12004 AC067852.2-201ENST00000590513 2313 ntBASIC17.87■□□□□ 0.45
PCNAP12004 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.87■□□□□ 0.45
PCNAP12004 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCNAP12004 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.87■□□□□ 0.45
PCNAP12004 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms