Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 LAGE3P1-201ENST00000425356 484 ntBASIC18.51■□□□□ 0.55
SRFP11831 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 AC007967.2-201ENST00000432613 625 ntBASIC18.51■□□□□ 0.55
SRFP11831 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.51■□□□□ 0.55
SRFP11831 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.51■□□□□ 0.55
SRFP11831 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.51■□□□□ 0.55
SRFP11831 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
SRFP11831 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SRFP11831 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.5■□□□□ 0.55
SRFP11831 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.5■□□□□ 0.55
SRFP11831 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.5■□□□□ 0.55
SRFP11831 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
SRFP11831 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.5■□□□□ 0.55
SRFP11831 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.5■□□□□ 0.55
SRFP11831 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 DNAJB3-202ENST00000449667 1266 ntBASIC18.5■□□□□ 0.55
SRFP11831 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.5■□□□□ 0.55
SRFP11831 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
SRFP11831 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.5■□□□□ 0.55
SRFP11831 MTDHP5-201ENST00000598980 586 ntBASIC18.5■□□□□ 0.55
SRFP11831 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 SDHAP2-201ENST00000455183 2001 ntBASIC18.5■□□□□ 0.55
SRFP11831 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.5■□□□□ 0.55
SRFP11831 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRFP11831 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SRFP11831 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.49■□□□□ 0.55
SRFP11831 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SRFP11831 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
SRFP11831 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SRFP11831 KRT18P65-201ENST00000439811 1286 ntBASIC18.49■□□□□ 0.55
SRFP11831 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.49■□□□□ 0.55
SRFP11831 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.49■□□□□ 0.55
SRFP11831 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.49■□□□□ 0.55
SRFP11831 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.49■□□□□ 0.55
SRFP11831 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.49■□□□□ 0.55
SRFP11831 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SRFP11831 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.49■□□□□ 0.55
SRFP11831 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SRFP11831 LINC00602-201ENST00000629776 2065 ntBASIC18.49■□□□□ 0.55
SRFP11831 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SRFP11831 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRFP11831 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.48■□□□□ 0.55
SRFP11831 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SRFP11831 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms