Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PTPRFP10586 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21■□□□□ 0.95
PTPRFP10586 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21■□□□□ 0.95
PTPRFP10586 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPRFP10586 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PTPRFP10586 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21■□□□□ 0.95
PTPRFP10586 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21■□□□□ 0.95
PTPRFP10586 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21■□□□□ 0.95
PTPRFP10586 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPRFP10586 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPRFP10586 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PTPRFP10586 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PTPRFP10586 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 HMGN1P19-201ENST00000436976 333 ntBASIC20.99■□□□□ 0.95
PTPRFP10586 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPRFP10586 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPRFP10586 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.99■□□□□ 0.95
PTPRFP10586 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.99■□□□□ 0.95
PTPRFP10586 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.99■□□□□ 0.95
PTPRFP10586 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPRFP10586 Z83851.2-201ENST00000609564 659 ntBASIC20.99■□□□□ 0.95
PTPRFP10586 FAM215A-202ENST00000632077 792 ntBASIC20.99■□□□□ 0.95
PTPRFP10586 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
PTPRFP10586 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPRFP10586 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPRFP10586 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPRFP10586 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPRFP10586 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPRFP10586 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.98■□□□□ 0.95
PTPRFP10586 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPRFP10586 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 RNA5SP415-201ENST00000517246 115 ntBASIC20.98■□□□□ 0.95
PTPRFP10586 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTPRFP10586 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPRFP10586 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPRFP10586 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.98■□□□□ 0.95
PTPRFP10586 AC025062.2-201ENST00000605477 670 ntBASIC20.98■□□□□ 0.95
PTPRFP10586 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.98■□□□□ 0.95
PTPRFP10586 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPRFP10586 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPRFP10586 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PTPRFP10586 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 MED15P5-201ENST00000423150 992 ntBASIC20.97■□□□□ 0.95
PTPRFP10586 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPRFP10586 KRT18P65-201ENST00000439811 1286 ntBASIC20.97■□□□□ 0.95
PTPRFP10586 AC112698.1-201ENST00000510299 916 ntBASIC20.97■□□□□ 0.95
PTPRFP10586 AC055717.3-201ENST00000622967 595 ntBASIC20.97■□□□□ 0.95
PTPRFP10586 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPRFP10586 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 YBX2P1-201ENST00000394192 760 ntBASIC20.96■□□□□ 0.95
PTPRFP10586 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
PTPRFP10586 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPRFP10586 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PTPRFP10586 MTDHP4-201ENST00000600287 670 ntBASIC20.96■□□□□ 0.95
PTPRFP10586 FAM197Y3-203ENST00000618346 717 ntBASIC20.96■□□□□ 0.95
PTPRFP10586 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPRFP10586 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTPRFP10586 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTPRFP10586 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPRFP10586 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPRFP10586 ANO7L1-203ENST00000602586 1720 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms