Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GUSBP12-201ENST00000513727 720 ntBASIC18.49■□□□□ 0.55
RETP07949 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RETP07949 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.49■□□□□ 0.55
RETP07949 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RETP07949 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
RETP07949 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.49■□□□□ 0.55
RETP07949 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.49■□□□□ 0.55
RETP07949 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RETP07949 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RETP07949 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.49■□□□□ 0.55
RETP07949 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RETP07949 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.48■□□□□ 0.55
RETP07949 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RETP07949 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.48■□□□□ 0.55
RETP07949 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
RETP07949 AC005104.2-201ENST00000427818 678 ntBASIC18.48■□□□□ 0.55
RETP07949 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.48■□□□□ 0.55
RETP07949 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.48■□□□□ 0.55
RETP07949 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.48■□□□□ 0.55
RETP07949 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 KRT8P7-201ENST00000533003 1432 ntBASIC18.48■□□□□ 0.55
RETP07949 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RETP07949 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.47■□□□□ 0.55
RETP07949 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.47■□□□□ 0.55
RETP07949 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RETP07949 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.47■□□□□ 0.55
RETP07949 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.47■□□□□ 0.55
RETP07949 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.47■□□□□ 0.55
RETP07949 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.47■□□□□ 0.55
RETP07949 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RETP07949 GPR32P1-201ENST00000601788 811 ntBASIC18.47■□□□□ 0.55
RETP07949 AL592071.1-201ENST00000611956 408 ntBASIC18.47■□□□□ 0.55
RETP07949 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.47■□□□□ 0.55
RETP07949 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.47■□□□□ 0.55
RETP07949 AC124864.1-201ENST00000623408 392 ntBASIC18.47■□□□□ 0.55
RETP07949 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RETP07949 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.47■□□□□ 0.55
RETP07949 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RETP07949 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.47■□□□□ 0.55
RETP07949 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RETP07949 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RETP07949 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RETP07949 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RETP07949 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RETP07949 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RETP07949 AC104417.2-201ENST00000562989 1793 ntBASIC18.46■□□□□ 0.55
RETP07949 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.46■□□□□ 0.55
RETP07949 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.46■□□□□ 0.55
RETP07949 HMGN1P19-201ENST00000436976 333 ntBASIC18.46■□□□□ 0.55
RETP07949 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.46■□□□□ 0.55
RETP07949 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.46■□□□□ 0.55
RETP07949 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RETP07949 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RETP07949 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RETP07949 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms