Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CAPNS1P04632 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CAPNS1P04632 AL512353.2-201ENST00000448759 1962 ntBASIC18.25■□□□□ 0.51
CAPNS1P04632 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPNS1P04632 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPNS1P04632 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPNS1P04632 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.25■□□□□ 0.51
CAPNS1P04632 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPNS1P04632 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CAPNS1P04632 AC011498.5-201ENST00000592027 486 ntBASIC18.25■□□□□ 0.51
CAPNS1P04632 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPNS1P04632 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPNS1P04632 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CAPNS1P04632 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CAPNS1P04632 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CAPNS1P04632 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPNS1P04632 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPNS1P04632 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CAPNS1P04632 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CAPNS1P04632 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
CAPNS1P04632 AL121672.3-201ENST00000608644 468 ntBASIC18.24■□□□□ 0.51
CAPNS1P04632 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPNS1P04632 AC067852.2-201ENST00000590513 2313 ntBASIC18.24■□□□□ 0.51
CAPNS1P04632 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CAPNS1P04632 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CAPNS1P04632 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPNS1P04632 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPNS1P04632 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPNS1P04632 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPNS1P04632 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPNS1P04632 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPNS1P04632 AC092183.1-201ENST00000469884 875 ntBASIC18.23■□□□□ 0.51
CAPNS1P04632 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPNS1P04632 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 BX640515.1-201ENST00000617215 977 ntBASIC18.23■□□□□ 0.51
CAPNS1P04632 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPNS1P04632 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CAPNS1P04632 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.22■□□□□ 0.51
CAPNS1P04632 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CAPNS1P04632 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPNS1P04632 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CAPNS1P04632 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 BX276092.5-203ENST00000456199 560 ntBASIC18.22■□□□□ 0.51
CAPNS1P04632 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.22■□□□□ 0.51
CAPNS1P04632 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.22■□□□□ 0.51
CAPNS1P04632 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPNS1P04632 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPNS1P04632 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.22■□□□□ 0.51
CAPNS1P04632 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.22■□□□□ 0.51
CAPNS1P04632 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPNS1P04632 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CAPNS1P04632 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPNS1P04632 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 KRT16P6-202ENST00000425692 1426 ntBASIC18.22■□□□□ 0.51
CAPNS1P04632 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.22■□□□□ 0.51
CAPNS1P04632 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPNS1P04632 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
CAPNS1P04632 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms