Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 ARMC10P1-201ENST00000313754 855 ntBASIC19.4■□□□□ 0.7
ZBED1O96006 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 AC112907.2-201ENST00000448639 330 ntBASIC19.4■□□□□ 0.7
ZBED1O96006 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.4■□□□□ 0.7
ZBED1O96006 AC087388.1-201ENST00000571370 1112 ntBASIC19.4■□□□□ 0.7
ZBED1O96006 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.4■□□□□ 0.7
ZBED1O96006 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.4■□□□□ 0.7
ZBED1O96006 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.4■□□□□ 0.7
ZBED1O96006 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 AC005082.1-201ENST00000413042 2259 ntBASIC19.4■□□□□ 0.7
ZBED1O96006 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.4■□□□□ 0.7
ZBED1O96006 AL163051.1-201ENST00000569214 1512 ntBASIC19.4■□□□□ 0.7
ZBED1O96006 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
ZBED1O96006 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.39■□□□□ 0.7
ZBED1O96006 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ZBED1O96006 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ZBED1O96006 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZBED1O96006 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.39■□□□□ 0.69
ZBED1O96006 AC090164.3-201ENST00000610780 2143 ntBASIC19.39■□□□□ 0.69
ZBED1O96006 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZBED1O96006 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 AL671277.2-201ENST00000458060 996 ntBASIC19.39■□□□□ 0.69
ZBED1O96006 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.39■□□□□ 0.69
ZBED1O96006 AC009065.1-201ENST00000564055 1225 ntBASIC19.39■□□□□ 0.69
ZBED1O96006 HYMAI.1-201ENST00000620949 238 ntBASIC19.39■□□□□ 0.69
ZBED1O96006 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.39■□□□□ 0.69
ZBED1O96006 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
ZBED1O96006 AC026471.1-201ENST00000564629 3026 ntBASIC19.39■□□□□ 0.69
ZBED1O96006 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.39■□□□□ 0.69
ZBED1O96006 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.39■□□□□ 0.69
ZBED1O96006 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ZBED1O96006 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 LETM1P2-201ENST00000597330 2178 ntBASIC19.39■□□□□ 0.69
ZBED1O96006 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZBED1O96006 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.38■□□□□ 0.69
ZBED1O96006 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ZBED1O96006 AL031133.1-201ENST00000406807 723 ntBASIC19.38■□□□□ 0.69
ZBED1O96006 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.38■□□□□ 0.69
ZBED1O96006 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.38■□□□□ 0.69
ZBED1O96006 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.38■□□□□ 0.69
ZBED1O96006 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.38■□□□□ 0.69
ZBED1O96006 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ZBED1O96006 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZBED1O96006 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.37■□□□□ 0.69
ZBED1O96006 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZBED1O96006 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.37■□□□□ 0.69
ZBED1O96006 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.37■□□□□ 0.69
ZBED1O96006 AC092597.1-201ENST00000487352 616 ntBASIC19.37■□□□□ 0.69
ZBED1O96006 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
ZBED1O96006 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.37■□□□□ 0.69
ZBED1O96006 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.37■□□□□ 0.69
ZBED1O96006 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
ZBED1O96006 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZBED1O96006 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZBED1O96006 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZBED1O96006 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms