Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MBD3O95983 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.06■□□□□ 0.96
MBD3O95983 AC092437.1-201ENST00000624794 1048 ntBASIC21.06■□□□□ 0.96
MBD3O95983 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
MBD3O95983 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
MBD3O95983 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MBD3O95983 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.06■□□□□ 0.96
MBD3O95983 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MBD3O95983 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD3O95983 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MBD3O95983 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 KRT18P55-202ENST00000578578 1546 ntBASIC21.05■□□□□ 0.96
MBD3O95983 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MBD3O95983 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 POM121L13P-201ENST00000422362 380 ntBASIC21.05■□□□□ 0.96
MBD3O95983 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.05■□□□□ 0.96
MBD3O95983 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MBD3O95983 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MBD3O95983 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MBD3O95983 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MBD3O95983 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.04■□□□□ 0.96
MBD3O95983 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 GUSBP6-202ENST00000438529 1198 ntBASIC21.04■□□□□ 0.96
MBD3O95983 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 UNC93B4-201ENST00000505679 747 ntBASIC21.04■□□□□ 0.96
MBD3O95983 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 AC083880.1-201ENST00000608266 535 ntBASIC21.04■□□□□ 0.96
MBD3O95983 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.04■□□□□ 0.96
MBD3O95983 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.04■□□□□ 0.96
MBD3O95983 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.04■□□□□ 0.96
MBD3O95983 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MBD3O95983 AC106820.2-201ENST00000563775 3264 ntBASIC21.03■□□□□ 0.96
MBD3O95983 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
MBD3O95983 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.03■□□□□ 0.96
MBD3O95983 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.03■□□□□ 0.96
MBD3O95983 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
MBD3O95983 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
MBD3O95983 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.03■□□□□ 0.96
MBD3O95983 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
MBD3O95983 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.03■□□□□ 0.96
MBD3O95983 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
MBD3O95983 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MBD3O95983 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
MBD3O95983 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3O95983 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3O95983 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3O95983 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.02■□□□□ 0.96
MBD3O95983 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3O95983 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MBD3O95983 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms