Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BEST1O76090 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.23■□□□□ 0.67
BEST1O76090 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST1O76090 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.23■□□□□ 0.67
BEST1O76090 AL020996.1-203ENST00000536896 2307 ntBASIC19.23■□□□□ 0.67
BEST1O76090 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BEST1O76090 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BEST1O76090 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST1O76090 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST1O76090 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
BEST1O76090 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
BEST1O76090 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.23■□□□□ 0.67
BEST1O76090 BX276092.5-203ENST00000456199 560 ntBASIC19.23■□□□□ 0.67
BEST1O76090 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
BEST1O76090 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST1O76090 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.23■□□□□ 0.67
BEST1O76090 NPAP1P7-201ENST00000613027 823 ntBASIC19.23■□□□□ 0.67
BEST1O76090 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
BEST1O76090 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST1O76090 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST1O76090 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BEST1O76090 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.23■□□□□ 0.67
BEST1O76090 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST1O76090 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.23■□□□□ 0.67
BEST1O76090 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST1O76090 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST1O76090 GMCL1P1-201ENST00000463439 1581 ntBASIC19.23■□□□□ 0.67
BEST1O76090 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.22■□□□□ 0.67
BEST1O76090 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.22■□□□□ 0.67
BEST1O76090 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.22■□□□□ 0.67
BEST1O76090 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 TSSC2-201ENST00000450217 709 ntBASIC19.22■□□□□ 0.67
BEST1O76090 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.22■□□□□ 0.67
BEST1O76090 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 AL121672.3-201ENST00000608644 468 ntBASIC19.22■□□□□ 0.67
BEST1O76090 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
BEST1O76090 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.22■□□□□ 0.67
BEST1O76090 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST1O76090 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST1O76090 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST1O76090 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
BEST1O76090 AL353692.3-201ENST00000407031 1396 ntBASIC19.21■□□□□ 0.67
BEST1O76090 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BEST1O76090 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BEST1O76090 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BEST1O76090 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
BEST1O76090 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.21■□□□□ 0.67
BEST1O76090 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.21■□□□□ 0.67
BEST1O76090 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.21■□□□□ 0.67
BEST1O76090 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST1O76090 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
BEST1O76090 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST1O76090 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST1O76090 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.2■□□□□ 0.66
BEST1O76090 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.2■□□□□ 0.66
BEST1O76090 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.2■□□□□ 0.66
BEST1O76090 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.2■□□□□ 0.66
BEST1O76090 ATP5G2P1-201ENST00000433580 426 ntBASIC19.2■□□□□ 0.66
BEST1O76090 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.2■□□□□ 0.66
BEST1O76090 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.2■□□□□ 0.66
BEST1O76090 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.2■□□□□ 0.66
BEST1O76090 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.2■□□□□ 0.66
BEST1O76090 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.2■□□□□ 0.66
BEST1O76090 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.2■□□□□ 0.66
BEST1O76090 MIR3180-1-201ENST00000580374 94 ntBASIC19.2■□□□□ 0.66
BEST1O76090 MIR3180-3-201ENST00000584616 94 ntBASIC19.2■□□□□ 0.66
BEST1O76090 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.2■□□□□ 0.66
BEST1O76090 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
BEST1O76090 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.2■□□□□ 0.66
BEST1O76090 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms