Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.44■□□□□ 0.54
RFPL1O75677 AC130371.2-201ENST00000619443 611 ntBASIC18.44■□□□□ 0.54
RFPL1O75677 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.44■□□□□ 0.54
RFPL1O75677 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 KRT18P22-201ENST00000402024 1347 ntBASIC18.44■□□□□ 0.54
RFPL1O75677 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RFPL1O75677 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 FLJ13224-201ENST00000313737 1514 ntBASIC18.44■□□□□ 0.54
RFPL1O75677 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RFPL1O75677 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RFPL1O75677 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RFPL1O75677 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.43■□□□□ 0.54
RFPL1O75677 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
RFPL1O75677 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.43■□□□□ 0.54
RFPL1O75677 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.43■□□□□ 0.54
RFPL1O75677 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.43■□□□□ 0.54
RFPL1O75677 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 AC008622.2-201ENST00000617006 1229 ntBASIC18.43■□□□□ 0.54
RFPL1O75677 CR392000.1-201ENST00000624770 1228 ntBASIC18.43■□□□□ 0.54
RFPL1O75677 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.43■□□□□ 0.54
RFPL1O75677 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFPL1O75677 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 KRT16P1-201ENST00000399124 1418 ntBASIC18.42■□□□□ 0.54
RFPL1O75677 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
RFPL1O75677 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFPL1O75677 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.42■□□□□ 0.54
RFPL1O75677 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.42■□□□□ 0.54
RFPL1O75677 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RFPL1O75677 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.42■□□□□ 0.54
RFPL1O75677 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.42■□□□□ 0.54
RFPL1O75677 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFPL1O75677 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.42■□□□□ 0.54
RFPL1O75677 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.42■□□□□ 0.54
RFPL1O75677 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFPL1O75677 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.42■□□□□ 0.54
RFPL1O75677 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.42■□□□□ 0.54
RFPL1O75677 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFPL1O75677 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RFPL1O75677 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFPL1O75677 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RFPL1O75677 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
RFPL1O75677 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.41■□□□□ 0.54
RFPL1O75677 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 AL096828.2-201ENST00000567259 1965 ntBASIC18.41■□□□□ 0.54
RFPL1O75677 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFPL1O75677 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RFPL1O75677 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.41■□□□□ 0.54
RFPL1O75677 KRT18P57-201ENST00000443599 1254 ntBASIC18.41■□□□□ 0.54
RFPL1O75677 AC011506.1-201ENST00000474329 610 ntBASIC18.41■□□□□ 0.54
RFPL1O75677 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
RFPL1O75677 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL1O75677 FITM1-202ENST00000559294 800 ntBASIC18.41■□□□□ 0.54
RFPL1O75677 AC026271.3-201ENST00000571884 352 ntBASIC18.41■□□□□ 0.54
RFPL1O75677 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL1O75677 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFPL1O75677 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL1O75677 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL1O75677 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.41■□□□□ 0.54
RFPL1O75677 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.41■□□□□ 0.54
RFPL1O75677 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFPL1O75677 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RFPL1O75677 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.4■□□□□ 0.54
RFPL1O75677 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFPL1O75677 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms