Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GCSHP2-201ENST00000560971 527 ntBASIC16.36■□□□□ 0.21
TRAF3IP2O43734 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 GMCL1P1-201ENST00000463439 1581 ntBASIC16.35■□□□□ 0.21
TRAF3IP2O43734 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.35■□□□□ 0.21
TRAF3IP2O43734 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 COX11P1-201ENST00000489116 835 ntBASIC16.35■□□□□ 0.21
TRAF3IP2O43734 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 ABALON-201ENST00000629058 1903 ntBASIC16.35■□□□□ 0.21
TRAF3IP2O43734 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 AL390961.4-201ENST00000623958 2535 ntBASIC16.35■□□□□ 0.21
TRAF3IP2O43734 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP2O43734 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 AC090340.1-201ENST00000620778 4980 ntBASIC16.34■□□□□ 0.21
TRAF3IP2O43734 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 BX664615.1-201ENST00000443558 458 ntBASIC16.34■□□□□ 0.21
TRAF3IP2O43734 KRT18P57-201ENST00000443599 1254 ntBASIC16.34■□□□□ 0.21
TRAF3IP2O43734 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 AL441883.1-201ENST00000566170 1045 ntBASIC16.34■□□□□ 0.21
TRAF3IP2O43734 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms