Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.39■□□□□ 0.53
PFDN6O15212 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.39■□□□□ 0.53
PFDN6O15212 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.39■□□□□ 0.53
PFDN6O15212 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.39■□□□□ 0.53
PFDN6O15212 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.39■□□□□ 0.53
PFDN6O15212 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 KRT8P50-201ENST00000562022 1438 ntBASIC18.39■□□□□ 0.53
PFDN6O15212 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 BICD1-207ENST00000551848 1962 ntBASIC18.39■□□□□ 0.53
PFDN6O15212 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PFDN6O15212 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.38■□□□□ 0.53
PFDN6O15212 NEFHP1-201ENST00000412845 2629 ntBASIC18.38■□□□□ 0.53
PFDN6O15212 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PFDN6O15212 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.38■□□□□ 0.53
PFDN6O15212 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PFDN6O15212 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN6O15212 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.38■□□□□ 0.53
PFDN6O15212 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
PFDN6O15212 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN6O15212 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN6O15212 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PFDN6O15212 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.38■□□□□ 0.53
PFDN6O15212 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PFDN6O15212 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PFDN6O15212 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.37■□□□□ 0.53
PFDN6O15212 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PFDN6O15212 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PFDN6O15212 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PFDN6O15212 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.37■□□□□ 0.53
PFDN6O15212 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.37■□□□□ 0.53
PFDN6O15212 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.37■□□□□ 0.53
PFDN6O15212 AC112497.1-201ENST00000624824 639 ntBASIC18.37■□□□□ 0.53
PFDN6O15212 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.37■□□□□ 0.53
PFDN6O15212 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.37■□□□□ 0.53
PFDN6O15212 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PFDN6O15212 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.37■□□□□ 0.53
PFDN6O15212 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 AC020916.1-201ENST00000587762 1774 ntBASIC18.37■□□□□ 0.53
PFDN6O15212 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.37■□□□□ 0.53
PFDN6O15212 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
PFDN6O15212 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.37■□□□□ 0.53
PFDN6O15212 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PFDN6O15212 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.37■□□□□ 0.53
PFDN6O15212 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PFDN6O15212 MIR149-201ENST00000384879 89 ntBASIC18.36■□□□□ 0.53
PFDN6O15212 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.36■□□□□ 0.53
PFDN6O15212 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 HMGA1P5-201ENST00000412453 271 ntBASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.36■□□□□ 0.53
PFDN6O15212 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PFDN6O15212 MIR3180-4-201ENST00000582223 153 ntBASIC18.36■□□□□ 0.53
PFDN6O15212 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PFDN6O15212 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms