Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD2O14647 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC25.4■■□□□ 1.66
CHD2O14647 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC25.4■■□□□ 1.66
CHD2O14647 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC25.4■■□□□ 1.66
CHD2O14647 AC112698.1-201ENST00000510299 916 ntBASIC25.4■■□□□ 1.66
CHD2O14647 AC005829.1-201ENST00000570002 483 ntBASIC25.4■■□□□ 1.66
CHD2O14647 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC25.4■■□□□ 1.66
CHD2O14647 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC25.4■■□□□ 1.66
CHD2O14647 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC25.4■■□□□ 1.66
CHD2O14647 AC073592.4-201ENST00000623827 446 ntBASIC25.4■■□□□ 1.66
CHD2O14647 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD2O14647 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC25.4■■□□□ 1.66
CHD2O14647 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD2O14647 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD2O14647 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD2O14647 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC25.4■■□□□ 1.66
CHD2O14647 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CHD2O14647 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CHD2O14647 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD2O14647 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC25.4■■□□□ 1.66
CHD2O14647 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD2O14647 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD2O14647 PGM5P2-202ENST00000637225 1043 ntBASIC25.4■■□□□ 1.66
CHD2O14647 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD2O14647 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHD2O14647 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHD2O14647 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHD2O14647 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.39■■□□□ 1.65
CHD2O14647 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CHD2O14647 AC007967.3-201ENST00000434308 558 ntBASIC25.39■■□□□ 1.65
CHD2O14647 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CHD2O14647 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CHD2O14647 AC006557.2-201ENST00000592985 1240 ntBASIC25.39■■□□□ 1.65
CHD2O14647 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC25.39■■□□□ 1.65
CHD2O14647 AP000867.4-201ENST00000641616 219 ntBASIC25.39■■□□□ 1.65
CHD2O14647 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC25.39■■□□□ 1.65
CHD2O14647 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHD2O14647 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
CHD2O14647 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
CHD2O14647 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHD2O14647 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC25.38■■□□□ 1.65
CHD2O14647 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC25.38■■□□□ 1.65
CHD2O14647 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 AC136632.2-201ENST00000512891 861 ntBASIC25.38■■□□□ 1.65
CHD2O14647 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC25.38■■□□□ 1.65
CHD2O14647 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CHD2O14647 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD2O14647 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CHD2O14647 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD2O14647 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD2O14647 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC25.37■■□□□ 1.65
CHD2O14647 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD2O14647 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC25.37■■□□□ 1.65
CHD2O14647 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.37■■□□□ 1.65
CHD2O14647 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CHD2O14647 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD2O14647 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD2O14647 LINC01006-201ENST00000333319 2292 ntBASIC25.37■■□□□ 1.65
CHD2O14647 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CHD2O14647 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CHD2O14647 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CHD2O14647 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD2O14647 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC25.37■■□□□ 1.65
CHD2O14647 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD2O14647 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
CHD2O14647 PMPCAP1-201ENST00000508114 1576 ntBASIC25.37■■□□□ 1.65
CHD2O14647 AC097374.2-201ENST00000618617 1306 ntBASIC25.36■■□□□ 1.65
CHD2O14647 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD2O14647 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.36■■□□□ 1.65
CHD2O14647 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHD2O14647 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC25.36■■□□□ 1.65
CHD2O14647 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHD2O14647 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC25.36■■□□□ 1.65
CHD2O14647 BX005266.1-201ENST00000473402 457 ntBASIC25.36■■□□□ 1.65
CHD2O14647 CIPC-205ENST00000555437 566 ntTSL 3 BASIC25.36■■□□□ 1.65
CHD2O14647 AC092865.6-201ENST00000642101 219 ntBASIC25.36■■□□□ 1.65
CHD2O14647 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CHD2O14647 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD2O14647 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CHD2O14647 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CHD2O14647 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
CHD2O14647 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC25.35■■□□□ 1.65
CHD2O14647 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CHD2O14647 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC25.35■■□□□ 1.65
CHD2O14647 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC25.35■■□□□ 1.65
CHD2O14647 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC25.35■■□□□ 1.65
CHD2O14647 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms