Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CHD1O14646 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHD1O14646 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
CHD1O14646 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHD1O14646 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CHD1O14646 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC29.57■■■□□ 2.32
CHD1O14646 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHD1O14646 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHD1O14646 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
CHD1O14646 SRP19-202ENST00000445150 833 ntTSL 2 BASIC29.57■■■□□ 2.32
CHD1O14646 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHD1O14646 AL390955.2-201ENST00000603032 514 ntBASIC29.57■■■□□ 2.32
CHD1O14646 CITED2-204ENST00000618718 901 ntTSL 2 BASIC29.57■■■□□ 2.32
CHD1O14646 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC29.56■■■□□ 2.32
CHD1O14646 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CHD1O14646 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
CHD1O14646 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC29.56■■■□□ 2.32
CHD1O14646 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
CHD1O14646 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC29.56■■■□□ 2.32
CHD1O14646 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHD1O14646 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHD1O14646 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHD1O14646 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC29.56■■■□□ 2.32
CHD1O14646 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC29.56■■■□□ 2.32
CHD1O14646 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CHD1O14646 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CHD1O14646 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC29.56■■■□□ 2.32
CHD1O14646 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC29.56■■■□□ 2.32
CHD1O14646 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHD1O14646 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHD1O14646 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC29.55■■■□□ 2.32
CHD1O14646 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC29.55■■■□□ 2.32
CHD1O14646 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CHD1O14646 AC005225.4-201ENST00000557330 545 ntBASIC29.55■■■□□ 2.32
CHD1O14646 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC29.55■■■□□ 2.32
CHD1O14646 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
CHD1O14646 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC29.54■■■□□ 2.32
CHD1O14646 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 AC008687.5-201ENST00000593746 558 ntBASIC29.54■■■□□ 2.32
CHD1O14646 IRX1P1-201ENST00000438849 1838 ntBASIC29.54■■■□□ 2.32
CHD1O14646 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 PMPCAP1-201ENST00000508114 1576 ntBASIC29.54■■■□□ 2.32
CHD1O14646 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC29.54■■■□□ 2.32
CHD1O14646 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC29.54■■■□□ 2.32
CHD1O14646 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC29.54■■■□□ 2.32
CHD1O14646 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHD1O14646 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC29.54■■■□□ 2.32
CHD1O14646 CCND1-203ENST00000536559 553 ntTSL 3 BASIC29.54■■■□□ 2.32
CHD1O14646 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC29.54■■■□□ 2.32
CHD1O14646 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC29.54■■■□□ 2.32
CHD1O14646 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHD1O14646 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CHD1O14646 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CHD1O14646 AC007967.3-201ENST00000434308 558 ntBASIC29.53■■■□□ 2.32
CHD1O14646 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHD1O14646 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC29.53■■■□□ 2.32
CHD1O14646 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHD1O14646 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHD1O14646 ASL-204ENST00000395331 1538 ntTSL 5 BASIC29.53■■■□□ 2.32
CHD1O14646 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CHD1O14646 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC29.52■■■□□ 2.32
CHD1O14646 PMS2P4-201ENST00000412466 1052 ntBASIC29.52■■■□□ 2.32
CHD1O14646 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC29.52■■■□□ 2.32
CHD1O14646 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
CHD1O14646 DUX4L17-201ENST00000557360 1267 ntBASIC29.52■■■□□ 2.32
CHD1O14646 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 MED29-202ENST00000594368 1471 ntTSL 2 BASIC29.52■■■□□ 2.32
CHD1O14646 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 FEM1AP3-201ENST00000403722 1741 ntBASIC29.52■■■□□ 2.32
CHD1O14646 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CHD1O14646 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CHD1O14646 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CHD1O14646 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC29.51■■■□□ 2.32
CHD1O14646 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
CHD1O14646 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC29.51■■■□□ 2.32
CHD1O14646 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
CHD1O14646 AC023141.5-201ENST00000458585 616 ntBASIC29.51■■■□□ 2.32
CHD1O14646 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.32
CHD1O14646 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CHD1O14646 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC29.51■■■□□ 2.31
CHD1O14646 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHD1O14646 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHD1O14646 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC29.51■■■□□ 2.31
CHD1O14646 MRPL20P1-201ENST00000400819 433 ntBASIC29.51■■■□□ 2.31
CHD1O14646 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC29.51■■■□□ 2.31
CHD1O14646 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC29.51■■■□□ 2.31
CHD1O14646 AC010654.1-201ENST00000615722 808 ntBASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms