Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 GMCL1P1-201ENST00000463439 1581 ntBASIC17.01■□□□□ 0.31
TNFRSF11BO00300 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TNFRSF11BO00300 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 SIRPAP1-201ENST00000448467 1770 ntBASIC17■□□□□ 0.31
TNFRSF11BO00300 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TNFRSF11BO00300 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TNFRSF11BO00300 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17■□□□□ 0.31
TNFRSF11BO00300 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TNFRSF11BO00300 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17■□□□□ 0.31
TNFRSF11BO00300 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17■□□□□ 0.31
TNFRSF11BO00300 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17■□□□□ 0.31
TNFRSF11BO00300 AC004951.3-201ENST00000418645 1148 ntBASIC17■□□□□ 0.31
TNFRSF11BO00300 NIFKP9-201ENST00000419265 221 ntBASIC17■□□□□ 0.31
TNFRSF11BO00300 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17■□□□□ 0.31
TNFRSF11BO00300 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17■□□□□ 0.31
TNFRSF11BO00300 AC233263.1-201ENST00000578059 224 ntBASIC17■□□□□ 0.31
TNFRSF11BO00300 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TNFRSF11BO00300 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 AC012317.2-201ENST00000623305 2251 ntBASIC17■□□□□ 0.31
TNFRSF11BO00300 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17■□□□□ 0.31
TNFRSF11BO00300 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 AL109659.2-201ENST00000606809 1674 ntBASIC17■□□□□ 0.31
TNFRSF11BO00300 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17■□□□□ 0.31
TNFRSF11BO00300 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.99■□□□□ 0.31
TNFRSF11BO00300 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TNFRSF11BO00300 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms