Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.16■□□□□ 0.5
TLR4O00206 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
TLR4O00206 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.16■□□□□ 0.5
TLR4O00206 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.16■□□□□ 0.5
TLR4O00206 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.16■□□□□ 0.5
TLR4O00206 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.16■□□□□ 0.5
TLR4O00206 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TLR4O00206 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 AC138894.3-201ENST00000603787 634 ntBASIC18.16■□□□□ 0.5
TLR4O00206 AL592071.1-201ENST00000611956 408 ntBASIC18.16■□□□□ 0.5
TLR4O00206 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TLR4O00206 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TLR4O00206 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.16■□□□□ 0.5
TLR4O00206 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TLR4O00206 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.15■□□□□ 0.5
TLR4O00206 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 KRT8P50-201ENST00000562022 1438 ntBASIC18.15■□□□□ 0.5
TLR4O00206 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TLR4O00206 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TLR4O00206 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TLR4O00206 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.15■□□□□ 0.5
TLR4O00206 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TLR4O00206 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR4O00206 RN7SL606P-201ENST00000472779 293 ntBASIC18.15■□□□□ 0.5
TLR4O00206 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.15■□□□□ 0.5
TLR4O00206 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.15■□□□□ 0.5
TLR4O00206 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR4O00206 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.15■□□□□ 0.5
TLR4O00206 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR4O00206 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.15■□□□□ 0.5
TLR4O00206 AC099336.1-202ENST00000602961 463 ntBASIC18.15■□□□□ 0.5
TLR4O00206 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.15■□□□□ 0.5
TLR4O00206 AL031008.1-201ENST00000619963 541 ntBASIC18.15■□□□□ 0.5
TLR4O00206 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TLR4O00206 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TLR4O00206 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR4O00206 AL353692.3-201ENST00000407031 1396 ntBASIC18.15■□□□□ 0.5
TLR4O00206 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.15■□□□□ 0.5
TLR4O00206 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TLR4O00206 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.14■□□□□ 0.5
TLR4O00206 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.14■□□□□ 0.5
TLR4O00206 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TLR4O00206 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TLR4O00206 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TLR4O00206 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TLR4O00206 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.14■□□□□ 0.49
TLR4O00206 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.14■□□□□ 0.49
TLR4O00206 AL160237.2-201ENST00000556165 472 ntBASIC18.14■□□□□ 0.49
TLR4O00206 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TLR4O00206 AC104692.2-201ENST00000603054 253 ntBASIC18.14■□□□□ 0.49
TLR4O00206 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.14■□□□□ 0.49
TLR4O00206 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.14■□□□□ 0.49
TLR4O00206 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.14■□□□□ 0.49
TLR4O00206 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
TLR4O00206 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TLR4O00206 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TLR4O00206 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
TLR4O00206 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TLR4O00206 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.13■□□□□ 0.49
TLR4O00206 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms