Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.8□□□□□ -0.04
SRRM4A7MD48 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SRRM4A7MD48 AC008764.6-201ENST00000595909 2069 ntBASIC14.8□□□□□ -0.04
SRRM4A7MD48 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRRM4A7MD48 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRRM4A7MD48 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.8□□□□□ -0.04
SRRM4A7MD48 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.8□□□□□ -0.04
SRRM4A7MD48 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 TSPY14P-201ENST00000303979 915 ntBASIC14.79□□□□□ -0.04
SRRM4A7MD48 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 C2orf69P3-201ENST00000565542 1120 ntBASIC14.79□□□□□ -0.04
SRRM4A7MD48 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.79□□□□□ -0.04
SRRM4A7MD48 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRRM4A7MD48 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 AC138028.4-201ENST00000564984 1845 ntBASIC14.78□□□□□ -0.04
SRRM4A7MD48 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 PHGDH-209ENST00000641074 1780 ntBASIC14.78□□□□□ -0.04
SRRM4A7MD48 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 KRT8P7-201ENST00000533003 1432 ntBASIC14.78□□□□□ -0.04
SRRM4A7MD48 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 AL096828.2-201ENST00000567259 1965 ntBASIC14.78□□□□□ -0.04
SRRM4A7MD48 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SRRM4A7MD48 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRRM4A7MD48 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRRM4A7MD48 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRRM4A7MD48 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRRM4A7MD48 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRRM4A7MD48 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRRM4A7MD48 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRRM4A7MD48 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.77□□□□□ -0.04
SRRM4A7MD48 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRRM4A7MD48 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRRM4A7MD48 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRRM4A7MD48 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.77□□□□□ -0.05
SRRM4A7MD48 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.77□□□□□ -0.05
SRRM4A7MD48 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.77□□□□□ -0.05
SRRM4A7MD48 EGLN1P1-201ENST00000531623 762 ntBASIC14.77□□□□□ -0.05
SRRM4A7MD48 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.77□□□□□ -0.05
SRRM4A7MD48 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRRM4A7MD48 AC010653.2-201ENST00000623505 997 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms