Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YJEFN3A6XGL0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 KRT89P-201ENST00000620027 1478 ntBASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 AC005332.3-201ENST00000589904 676 ntBASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.1■□□□□ 0.65
YJEFN3A6XGL0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 IGHGP-201ENST00000390555 1178 ntBASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 Z83836.1-201ENST00000624605 1642 ntBASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YJEFN3A6XGL0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
YJEFN3A6XGL0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
YJEFN3A6XGL0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
YJEFN3A6XGL0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.08■□□□□ 0.65
YJEFN3A6XGL0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.08■□□□□ 0.64
YJEFN3A6XGL0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms