Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
TBC1D3FA6NER0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TBC1D3FA6NER0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TBC1D3FA6NER0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 KRT17P6-201ENST00000453795 1220 ntBASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 KRT18P31-201ENST00000506277 1292 ntBASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 AC011840.4-201ENST00000578471 627 ntBASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3FA6NER0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 FAAHP1-202ENST00000446499 1238 ntBASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 AC008687.5-201ENST00000593746 558 ntBASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 BCL2-203ENST00000589955 5011 ntBASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TBC1D3FA6NER0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 AC246785.2-201ENST00000432512 513 ntBASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 EMBP1-201ENST00000458200 901 ntBASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TBC1D3FA6NER0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TBC1D3FA6NER0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms