Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 AC126763.1-201ENST00000552015 2118 ntBASIC19.88■□□□□ 0.77
CCDC66A2RUB6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC66A2RUB6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 MTDHP1-201ENST00000605323 784 ntBASIC19.87■□□□□ 0.77
CCDC66A2RUB6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC66A2RUB6 KRT8P41-201ENST00000533985 1514 ntBASIC19.86■□□□□ 0.77
CCDC66A2RUB6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 AC012317.2-201ENST00000623305 2251 ntBASIC19.86■□□□□ 0.77
CCDC66A2RUB6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC66A2RUB6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms