Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 AL032819.2-201ENST00000624543 2162 ntBASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 AC008687.5-201ENST00000593746 558 ntBASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 AC124864.1-201ENST00000623408 392 ntBASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSNK1G3Q9Y6M4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
CSNK1G3Q9Y6M4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CSNK1G3Q9Y6M4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 AL163051.1-201ENST00000569214 1512 ntBASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 IGHV3-47-201ENST00000425060 335 ntBASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 EMBP1-201ENST00000458200 901 ntBASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSNK1G3Q9Y6M4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.94■□□□□ 0.46
CSNK1G3Q9Y6M4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms