Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
DNMT3AQ9Y6K1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 AC093503.3-201ENST00000624917 2352 ntBASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 AC004408.2-201ENST00000623613 2777 ntBASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 AL162741.1-201ENST00000565563 1558 ntBASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.98■□□□□ 0.47
DNMT3AQ9Y6K1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 AC113404.2-201ENST00000507884 177 ntBASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
DNMT3AQ9Y6K1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 IER3-202ENST00000376377 1350 ntBASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 AP003733.1-201ENST00000491725 852 ntBASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 AL358472.4-201ENST00000633140 710 ntBASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DNMT3AQ9Y6K1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
DNMT3AQ9Y6K1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.96■□□□□ 0.46
DNMT3AQ9Y6K1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms