Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN16Q9Y5I7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AC135776.1-201ENST00000319817 2481 ntBASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AP003733.1-201ENST00000491725 852 ntBASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AC091076.1-201ENST00000610741 619 ntBASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN16Q9Y5I7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.05■□□□□ 0.32
CLDN16Q9Y5I7 LINC00167-201ENST00000530583 1419 ntBASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 Z83836.1-201ENST00000624605 1642 ntBASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 AC004263.2-201ENST00000617183 678 ntBASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN16Q9Y5I7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN16Q9Y5I7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms