Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 AL450487.1-201ENST00000426799 995 ntBASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 CA15P1-201ENST00000481698 905 ntBASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA4Q9Y5G9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGA4Q9Y5G9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGA4Q9Y5G9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
PCDHGA4Q9Y5G9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 AC026396.1-201ENST00000419388 421 ntBASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 HCG4P8-203ENST00000443049 980 ntBASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 AL353719.1-201ENST00000566847 864 ntBASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 AL023973.1-201ENST00000624619 620 ntBASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGA4Q9Y5G9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA4Q9Y5G9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms