Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB13Q9Y5F0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHB13Q9Y5F0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB13Q9Y5F0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PCDHB13Q9Y5F0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHB13Q9Y5F0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHB13Q9Y5F0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PCDHB13Q9Y5F0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 AC009102.3-201ENST00000623118 1491 ntBASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 HCG11-201ENST00000411553 5696 ntBASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 KRT18P57-201ENST00000443599 1254 ntBASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 GCSHP2-201ENST00000560971 527 ntBASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 AL023973.1-201ENST00000624619 620 ntBASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHB13Q9Y5F0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AC099343.3-201ENST00000605834 2503 ntBASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 MIR3917-201ENST00000580971 93 ntBASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AC139887.4-201ENST00000607877 719 ntBASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 AC011558.1-201ENST00000623459 338 ntBASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB13Q9Y5F0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB13Q9Y5F0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms