Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 UNC93B5-201ENST00000530315 699 ntBASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 MTDHP1-201ENST00000605323 784 ntBASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2D4Q9Y2X8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 GMCL1P1-201ENST00000463439 1581 ntBASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 AC004980.1-204ENST00000429707 299 ntBASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBE2D4Q9Y2X8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AC012313.1-201ENST00000593393 3059 ntBASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 AL109659.2-201ENST00000606809 1674 ntBASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D4Q9Y2X8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms