Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC009078.2-202ENST00000463353 338 ntBASIC25.05■■□□□ 1.6
NINLQ9Y2I6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
NINLQ9Y2I6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
NINLQ9Y2I6 UNC93B7-201ENST00000509439 705 ntBASIC25.04■■□□□ 1.6
NINLQ9Y2I6 FOSL1P1-201ENST00000511041 816 ntBASIC25.04■■□□□ 1.6
NINLQ9Y2I6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 TSPY12P-201ENST00000421279 868 ntBASIC25.03■■□□□ 1.6
NINLQ9Y2I6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 FICD-205ENST00000552758 603 ntTSL 2 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 AC011840.4-201ENST00000578471 627 ntBASIC25.03■■□□□ 1.6
NINLQ9Y2I6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 AC099336.1-202ENST00000602961 463 ntBASIC25.03■■□□□ 1.6
NINLQ9Y2I6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NINLQ9Y2I6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NINLQ9Y2I6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC25.01■■□□□ 1.6
NINLQ9Y2I6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 CROCCP3-202ENST00000420820 1947 ntBASIC25.01■■□□□ 1.59
NINLQ9Y2I6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 KRT18P65-201ENST00000439811 1286 ntBASIC25.01■■□□□ 1.59
NINLQ9Y2I6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 AC005336.2-201ENST00000593183 939 ntBASIC25.01■■□□□ 1.59
NINLQ9Y2I6 BNIP3P18-201ENST00000593976 575 ntBASIC25.01■■□□□ 1.59
NINLQ9Y2I6 AC138894.3-201ENST00000603787 634 ntBASIC25.01■■□□□ 1.59
NINLQ9Y2I6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NINLQ9Y2I6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NINLQ9Y2I6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC25■■□□□ 1.59
NINLQ9Y2I6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NINLQ9Y2I6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NINLQ9Y2I6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC25■■□□□ 1.59
NINLQ9Y2I6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
NINLQ9Y2I6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC25■■□□□ 1.59
NINLQ9Y2I6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC25■■□□□ 1.59
NINLQ9Y2I6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC25■■□□□ 1.59
NINLQ9Y2I6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC25■■□□□ 1.59
NINLQ9Y2I6 AC091304.2-201ENST00000564639 760 ntBASIC25■■□□□ 1.59
NINLQ9Y2I6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC25■■□□□ 1.59
NINLQ9Y2I6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC25■■□□□ 1.59
NINLQ9Y2I6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC25■■□□□ 1.59
NINLQ9Y2I6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC25■■□□□ 1.59
NINLQ9Y2I6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
NINLQ9Y2I6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NINLQ9Y2I6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms