Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FNDC3AQ9Y2H6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.77■□□□□ 0.6
FNDC3AQ9Y2H6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FNDC3AQ9Y2H6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
FNDC3AQ9Y2H6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.77■□□□□ 0.59
FNDC3AQ9Y2H6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 AL020996.1-203ENST00000536896 2307 ntBASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 MIR4674-201ENST00000582457 87 ntBASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 AL691432.3-201ENST00000621860 400 ntBASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 AC008556.1-201ENST00000610908 2040 ntBASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FNDC3AQ9Y2H6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 AL023284.2-201ENST00000405850 579 ntBASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 AC083906.6-201ENST00000641366 219 ntBASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 AC099343.3-201ENST00000605834 2503 ntBASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 AC036111.1-201ENST00000533973 1582 ntBASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
FNDC3AQ9Y2H6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms