Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHGC3Q9UN70 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 AL096828.2-201ENST00000567259 1965 ntBASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 RNF152P1-201ENST00000397754 604 ntBASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGC3Q9UN70 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 AC093010.1-201ENST00000473625 1624 ntBASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 SPDYE15P-201ENST00000424157 909 ntBASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 TSPY5P-201ENST00000426936 936 ntBASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 AC079602.3-201ENST00000623931 403 ntBASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 NOC2LP1-202ENST00000452600 2235 ntBASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGC3Q9UN70 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 AC104076.2-201ENST00000448912 469 ntBASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHGC3Q9UN70 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDHGC3Q9UN70 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms