Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 MIR3180-1-201ENST00000580374 94 ntBASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 MIR3180-3-201ENST00000584616 94 ntBASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 AC004263.2-201ENST00000617183 678 ntBASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 KRT18P1-202ENST00000452408 1331 ntBASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN1Q9UMX0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 AC092329.2-201ENST00000598402 547 ntBASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 IGHV3-41-201ENST00000613121 348 ntBASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
UBQLN1Q9UMX0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 AC073592.3-201ENST00000625118 1834 ntBASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 TNXA-203ENST00000507684 2038 ntBASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 GUSBP12-201ENST00000513727 720 ntBASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 LINC01126-201ENST00000623515 1646 ntBASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN1Q9UMX0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBQLN1Q9UMX0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
UBQLN1Q9UMX0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 DRAXINP1-201ENST00000437611 948 ntBASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 GMCL1P1-201ENST00000463439 1581 ntBASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UBQLN1Q9UMX0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms