Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 AC117947.1-201ENST00000427448 529 ntBASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 KRT18P21-201ENST00000515767 1272 ntBASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 AC104390.1-201ENST00000555663 520 ntBASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PPARGC1AQ9UBK2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPARGC1AQ9UBK2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PPARGC1AQ9UBK2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPARGC1AQ9UBK2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PPARGC1AQ9UBK2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPARGC1AQ9UBK2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PPARGC1AQ9UBK2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 AC104076.2-201ENST00000448912 469 ntBASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 YBX1P2-201ENST00000489612 999 ntBASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 AC140113.3-201ENST00000605663 199 ntBASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 AC139887.4-201ENST00000607877 719 ntBASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 AL390961.4-201ENST00000623958 2535 ntBASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.14■□□□□ 0.65
PPARGC1AQ9UBK2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 SEC1P-202ENST00000473944 940 ntBASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 MIR3180-4-201ENST00000582223 153 ntBASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 AC011558.1-201ENST00000623459 338 ntBASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 AL023973.1-201ENST00000624619 620 ntBASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPARGC1AQ9UBK2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 KRT8P50-201ENST00000562022 1438 ntBASIC19.12■□□□□ 0.65
PPARGC1AQ9UBK2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms