Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCKIPSDQ9NZQ3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NCKIPSDQ9NZQ3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 AC009947.2-201ENST00000444014 672 ntBASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCKIPSDQ9NZQ3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 KRT8P11-201ENST00000409686 1436 ntBASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 IER3-202ENST00000376377 1350 ntBASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NCKIPSDQ9NZQ3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 PCED1CP-201ENST00000419887 785 ntBASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 AL023973.1-201ENST00000624619 620 ntBASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms